PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG030580.3
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YC
Protein Properties Length: 148aa    MW: 16543.8 Da    PI: 5.2454
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG030580.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC170.71.7e-53141171101
             NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 
                       ql++fw++q   ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd
  TRIDC7AG030580.3  14 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 106
                       89******99999******************************************************************************** PP

             NF-YC  91 flvdivprdel 101
                       flvdivprde 
  TRIDC7AG030580.3 107 FLVDIVPRDEA 117
                       *********86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
AAASQQTAAQ QQQQLQVFWA EQYREIEATT DFKNHNLPLA RIKKIMKADE DVRMIAAEAP  60
VVFARACEMF ILELTHRGWA HAEENKRRTL QKSDIAAAIA RTEVFDFLVD IVPRDEAKDA  120
EAAVAAGMPH PAAGMPAADM GYYYVPQQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793RRTLQKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.37e-55NF-YC family protein