PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7AG030580.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | NF-YC | ||||||||
Protein Properties | Length: 175aa MW: 19206.9 Da PI: 5.5967 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 170 | 2.8e-53 | 41 | 144 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd TRIDC7AG030580.2 41 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 133 89******99999******************************************************************************** PP NF-YC 91 flvdivprdel 101 flvdivprde TRIDC7AG030580.2 134 FLVDIVPRDEA 144 *********86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 175 aa Download sequence |
AVYPAAPPPG YPHAPALYAP QPPPAAVAAA SQQTAAQQQQ QLQVFWAEQY REIEATTDFK 60 NHNLPLARIK KIMKADEDVR MIAAEAPVVF ARACEMFILE LTHRGWAHAE ENKRRTLQKS 120 DIAAAIARTE VFDFLVDIVP RDEAKDAEAA VAAGMPHPAA GMPAADMGYY YVPQQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 114 | 120 | RRTLQKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-57 | NF-YC family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7AG030580.2 |