PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG030580.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NF-YC | ||||||||
Protein Properties | Length: 199aa MW: 21534.6 Da PI: 5.6093 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 169.5 | 4e-53 | 65 | 168 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifd 90 ql++fw++q ie +tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt r w haeenkrrtl+ksdiaaa++rt++fd TRIDC7AG030580.1 65 QLQVFWAEQyreIEATTDFKNHNLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRGWAHAEENKRRTLQKSDIAAAIARTEVFD 157 89******99999******************************************************************************** PP NF-YC 91 flvdivprdel 101 flvdivprde TRIDC7AG030580.1 158 FLVDIVPRDEA 168 *********86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MEAKSTTPPP PGPVLGAPIG YPPAAVYPAA PPPGYPHAPA LYAPQPPPAA VAAASQQTAA 60 QQQQQLQVFW AEQYREIEAT TDFKNHNLPL ARIKKIMKAD EDVRMIAAEA PVVFARACEM 120 FILELTHRGW AHAEENKRRT LQKSDIAAAI ARTEVFDFLV DIVPRDEAKD AEAAVAAGMP 180 HPAAGMPAAD MGYYYVPQQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 144 | RRTLQKS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-57 | NF-YC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG030580.1 |