PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC7AG030020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 84aa MW: 9240.98 Da PI: 6.8039 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.8 | 1.2e-08 | 4 | 48 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT + + da +++ ++ +W +ar++g g+t +++k ++ TRIDC7AG030020.1 4 SWTFKQNKVFEDALAKYDKDtpdRWQNVAREVGDGKTVEDVKKHF 48 7*******************************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 84 aa Download sequence |
MSSSWTFKQN KVFEDALAKY DKDTPDRWQN VAREVGDGKT VEDVKKHFAE LEKDVDDIHT 60 NGAGSSSNNI KGGSSRGGSS HGQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75250.1 | 5e-22 | MYB_related family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC7AG030020.1 |