PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG029300.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 229aa MW: 24581.5 Da PI: 6.3368 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.4 | 6.4e-40 | 23 | 123 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkCa+dC++apyf +eq ++f +vhk+FGasnv+k+l+++p+++r da+ +++yeA+ar+rdP+yG+vg i++lqq++++l+a TRIDC7AG029300.1 23 PCGACKFLRRKCADDCIFAPYFDSEQgVEHFTAVHKVFGASNVSKILNQAPPHKRLDAAITVCYEAKARLRDPIYGCVGDIFALQQRVANLQA 115 7***********************9977***************************************************************** PP DUF260 93 elallkee 100 e+a l+++ TRIDC7AG029300.1 116 EVAFLQAH 123 ***99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MSGSSTSASV SVGGRPSGCS GGPCGACKFL RRKCADDCIF APYFDSEQGV EHFTAVHKVF 60 GASNVSKILN QAPPHKRLDA AITVCYEAKA RLRDPIYGCV GDIFALQQRV ANLQAEVAFL 120 QAHLTTPQQP SPPPFLSPPY IPMTTEFSIS ELASLSNVPN TIELSSLFDP SMQWAFQQQH 180 QQPYGQTGEG SGGTGNTNSN GDDLQALARE LLDRRSTGLT PQQPSNTQF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00220.1 | 3e-55 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG029300.1 |