PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG029220.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C3H | ||||||||
Protein Properties | Length: 334aa MW: 37593.9 Da PI: 8.0824 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22 | 2.9e-07 | 116 | 138 | 3 | 26 |
S---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHg 26 +++C+ fa++G C+yG+ C+ +Hg TRIDC7AG029220.5 116 MPICS-FAAGGNCPYGEECPHMHG 138 68999.**************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MFARFTREAH ALMVTVADMT MSRRNSPVRP PPSSSTATHV ASTSPQLLSS GRPLHLGHQT 60 NSSNQRQQIS MDKLAVSESK PAWRNEVQLD SVSEDGIGWS SIQTAQNQTS MKLADMPICS 120 FAAGGNCPYG EECPHMHGDL CAFCGKMCLH PYRPDERQEH IKLCEKNHKR LEALKRSQEI 180 ECSVCLDRVL SKPTAAERKF GLLSECDHPF CISCIRNWRG NSPTSGMDVN SALRACPICR 240 KLSYYVIPSV LWYFSKEEKL EITENYKAKL KSIDCKYFDF GTGTCPFGTS CFYKHAYRDG 300 RLEEVVLRHL DCDDGSTLIA KNIRLSDFLG RLHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G08505.1 | 1e-121 | C3H family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG029220.5 |