PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG027680.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family CO-like
Protein Properties Length: 396aa    MW: 43625.4 Da    PI: 4.6906
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG027680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box18.54.1e-06445540
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40
                       C+ ++e++   +C+++   lC +C  + H+       Ht++
  TRIDC7AG027680.1  4 LCDYCGEHRSMVYCRSDAASLCLSCDRNVHSAnalsrrHTRT 45
                      6******99*********************657888889876 PP
2zf-B_box25.92.1e-084789541
          zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                       C+++ ++++   C + ++ lC++C  ++H+       H++++
  TRIDC7AG027680.1 47 LCDRCASQPAMVRCLEENTSLCQNCDWNGHSAgssaagHKRQN 89
                      7*****************************6688899998876 PP
3CCT62.61.2e-21340383144
               CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 
                       R+ a++RYkeK+k+RkF+ kirYesRKa+A+ R+RvKGrFvk+ 
  TRIDC7AG027680.1 340 RDSAITRYKEKKKRRKFDHKIRYESRKARADVRKRVKGRFVKAG 383
                       899**************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MGALCDYCGE HRSMVYCRSD AASLCLSCDR NVHSANALSR RHTRTLLCDR CASQPAMVRC  60
LEENTSLCQN CDWNGHSAGS SAAGHKRQNI NCYSGCPSSA ELSRMWSFIL DIPNVAPELN  120
CEQVISMMSI SDSAVSNGDN AQGDNSLLDM ACATLDEEDK QKSVIGSSSE AGLNLLPPAN  180
NQTAVSLDST TAKYTPDKHM FSKDSIYEDF SMDDIDLSYE NYEELFGNSH IQTEELFDDA  240
GIDSYFEVKE ATAVNSDEQP KPKQPAASNA LSADSGMSNP AVKEDDSSLC IPVRQAISYS  300
GFTGESIPEE YQDCGVSPML LMGEPPWLPP GPDGSFAGIR DSAITRYKEK KKRRKFDHKI  360
RYESRKARAD VRKRVKGRFV KAGEAYDYDP LDTRSY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1350354KKKRR
2350355KKKRRK
3350376KKKRRKFDHKIRYESRKARADVRKRVK
4351377KKKRRKFDHKIRYESRKARADVRKRVK
5351355KKRRK
6352378KKKRRKFDHKIRYESRKARADVRKRVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07650.29e-96CO-like family protein