PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG026190.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 846aa MW: 93683.5 Da PI: 8.516

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG026190.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	117.4	7.5e-37	116	191	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC+adl + ++yhrrhkvCe h+k++ v ++++e+rfCqqCsrfh ++efDe+k+sCr+rLa+hn+rrrk+ TRIDC7AG026190.3 116 CQVDGCHADLGDDRDYHRRHKVCEPHTKSTLVRIRNIEHRFCQQCSRFHLVQEFDEGKKSCRSRLATHNRRRRKAP 191 *************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 846 aa Download sequence
MSSGLKNKKK KGHEWDLNDW RWDGNLFLAM PSPNADAPSG CGSRELGRAE EGGSFGAAAA 60 DKRRRRRRVT TVDNPEECSN TAIPHERIAV RGGQIGEEEG PASAAAGASS SSAPSCQVDG 120 CHADLGDDRD YHRRHKVCEP HTKSTLVRIR NIEHRFCQQC SRFHLVQEFD EGKKSCRSRL 180 ATHNRRRRKA PAEAVNSLGE NQSLTNTLLL LLRQLAGQDS AASSSEQING PNLLVSLLKN 240 LAAVAGTQAC QDMLKDATSS NAGNYVGNQS RPPVHAEEPP VKRRAQNFDL NDAYVEEDES 300 RTDKIIFKLF GKQPNDFPAD LRAQILNWLS HYPSDMESYI RPGCVILTIY LRLPNWMWDK 360 LNVDPAPWIE NLISISTRGF WEKGWLYARV QDHLTLSCNG RLMLVSPWQP VIGDKHQILC 420 VTPIAAACNS TANFSVRGFN IAQPATKLLC IFDGKYLVQE ATQKLHDDTR IQQGPQCLTF 480 SCSFPITSGR GFIEVEDYDQ SSISFPFVVA EESICCEIRM LEEKLNIIAF GEGRKDLMAS 540 RSQALKFLHE IGWLLQRSHT RATSSKAPQQ FRHRVVGFPA ARFRWLLSFA VDQEWCGVVK 600 MLLDTLFQGN IDIASPVEFV LGESLVFAAV NKRSKPLVAS LLRYTTKSAP VGSGAVATPA 660 RFLFTPDMTG PSDITPLHVA ATISNAAAVL DALTDDPQQL GIKTWKNARD ASGYTPEDYA 720 RRRGHTSYIQ MVQNKINSRL PAAHVSVSMT TTGIAEKHAD AGRPRSTDQT VFDVEKSPPG 780 CRQCVQLQHI AYRPCPNRFL SNRPAVLSLV AIAAVCVCVG LIMQSPPVIR GLPGPFLWNH 840 IRWGPT

Sequence ? help Back to Top

Protein Sequence Length: 846 aa Download sequence

MSSGLKNKKK KGHEWDLNDW RWDGNLFLAM PSPNADAPSG CGSRELGRAE EGGSFGAAAA  60
DKRRRRRRVT TVDNPEECSN TAIPHERIAV RGGQIGEEEG PASAAAGASS SSAPSCQVDG  120
CHADLGDDRD YHRRHKVCEP HTKSTLVRIR NIEHRFCQQC SRFHLVQEFD EGKKSCRSRL  180
ATHNRRRRKA PAEAVNSLGE NQSLTNTLLL LLRQLAGQDS AASSSEQING PNLLVSLLKN  240
LAAVAGTQAC QDMLKDATSS NAGNYVGNQS RPPVHAEEPP VKRRAQNFDL NDAYVEEDES  300
RTDKIIFKLF GKQPNDFPAD LRAQILNWLS HYPSDMESYI RPGCVILTIY LRLPNWMWDK  360
LNVDPAPWIE NLISISTRGF WEKGWLYARV QDHLTLSCNG RLMLVSPWQP VIGDKHQILC  420
VTPIAAACNS TANFSVRGFN IAQPATKLLC IFDGKYLVQE ATQKLHDDTR IQQGPQCLTF  480
SCSFPITSGR GFIEVEDYDQ SSISFPFVVA EESICCEIRM LEEKLNIIAF GEGRKDLMAS  540
RSQALKFLHE IGWLLQRSHT RATSSKAPQQ FRHRVVGFPA ARFRWLLSFA VDQEWCGVVK  600
MLLDTLFQGN IDIASPVEFV LGESLVFAAV NKRSKPLVAS LLRYTTKSAP VGSGAVATPA  660
RFLFTPDMTG PSDITPLHVA ATISNAAAVL DALTDDPQQL GIKTWKNARD ASGYTPEDYA  720
RRRGHTSYIQ MVQNKINSRL PAAHVSVSMT TTGIAEKHAD AGRPRSTDQT VFDVEKSPPG  780
CRQCVQLQHI AYRPCPNRFL SNRPAVLSLV AIAAVCVCVG LIMQSPPVIR GLPGPFLWNH  840
IRWGPT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	67	KRRRRR
2	62	68	KRRRRRR
3	62	69	KRRRRRRV
4	63	68	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	1e-171	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG026190.3