PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG026190.16

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 460aa MW: 50968.5 Da PI: 8.0922

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG026190.16	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	118.6	3.1e-37	94	169	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC+adl + ++yhrrhkvCe h+k++ v ++++e+rfCqqCsrfh ++efDe+k+sCr+rLa+hn+rrrk+ TRIDC7AG026190.16 94 CQVDGCHADLGDDRDYHRRHKVCEPHTKSTLVRIRNIEHRFCQQCSRFHLVQEFDEGKKSCRSRLATHNRRRRKAP 169 *************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 460 aa Download sequence
DGNLFLAMPS PNADAPSGCG SRELGRAEEG GSFGAAAADK RRRRRRVTTV DNPEECSNTA 60 IPHERIAVRG GQIGEEEGPA SAAAGASSSS APSCQVDGCH ADLGDDRDYH RRHKVCEPHT 120 KSTLVRIRNI EHRFCQQCSR FHLVQEFDEG KKSCRSRLAT HNRRRRKAPA EAVNSLGENQ 180 SLTNTLLLLL RQLAGQDSAA SSSEQINGPN LLVSLLKNLA AVAGTQACQD MLKDATSSNA 240 GNYVGNQSRP PVHAEEPPVK RRAQNFDLND AYVEEDESRT DKIIFKLFGK QPNDFPADLR 300 AQILNWLSHY PSDMESYIRP GCVILTIYLR LPNWMWDKLN VDPAPWIENL ISISTRGFWE 360 KGWLYARVQD HLTLSCNGLF ALFLSFTSLF FLYFYVRVQP TASYVCGFPF FAGRLMLVSP 420 WQPVIGDKHQ ILCVTPIAAA CNSTANFSVR GFNIAQPATK

Sequence ? help Back to Top

Protein Sequence Length: 460 aa Download sequence

DGNLFLAMPS PNADAPSGCG SRELGRAEEG GSFGAAAADK RRRRRRVTTV DNPEECSNTA  60
IPHERIAVRG GQIGEEEGPA SAAAGASSSS APSCQVDGCH ADLGDDRDYH RRHKVCEPHT  120
KSTLVRIRNI EHRFCQQCSR FHLVQEFDEG KKSCRSRLAT HNRRRRKAPA EAVNSLGENQ  180
SLTNTLLLLL RQLAGQDSAA SSSEQINGPN LLVSLLKNLA AVAGTQACQD MLKDATSSNA  240
GNYVGNQSRP PVHAEEPPVK RRAQNFDLND AYVEEDESRT DKIIFKLFGK QPNDFPADLR  300
AQILNWLSHY PSDMESYIRP GCVILTIYLR LPNWMWDKLN VDPAPWIENL ISISTRGFWE  360
KGWLYARVQD HLTLSCNGLF ALFLSFTSLF FLYFYVRVQP TASYVCGFPF FAGRLMLVSP  420
WQPVIGDKHQ ILCVTPIAAA CNSTANFSVR GFNIAQPATK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	40	45	KRRRRR
2	40	46	KRRRRRR
3	40	47	KRRRRRRV
4	41	46	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	4e-68	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG026190.16