PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG026190.14

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

SBP

Protein Properties

Length: 294aa MW: 31940.6 Da PI: 9.8965

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG026190.14	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	119.6	1.5e-37	132	207	2	77
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 Cqv+gC+adl + ++yhrrhkvCe h+k++ v ++++e+rfCqqCsrfh ++efDe+k+sCr+rLa+hn+rrrk+ TRIDC7AG026190.14 132 CQVDGCHADLGDDRDYHRRHKVCEPHTKSTLVRIRNIEHRFCQQCSRFHLVQEFDEGKKSCRSRLATHNRRRRKAP 207 *************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
LFRAQNRAGG RGVWGRMSSG LKNKKKKGHE WDLNDWRWDG NLFLAMPSPN ADAPSGCGSR 60 ELGRAEEGGS FGAAAADKRR RRRRVTTVDN PEECSNTAIP HERIAVRGGQ IGEEEGPASA 120 AAGASSSSAP SCQVDGCHAD LGDDRDYHRR HKVCEPHTKS TLVRIRNIEH RFCQQCSRFH 180 LVQEFDEGKK SCRSRLATHN RRRRKAPAEA VNSLGENQSL TNTLLLLLRQ LAGQDSAASS 240 SEQINGPNLL VSLLKNLAAV AGTQACQDML KDATSSNAGN YVGNQSRPPV HAGK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	83	KRRRRR
2	78	84	KRRRRRR
3	78	85	KRRRRRRV
4	79	84	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60030.1	7e-36	SBP family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG026190.14