PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG024960.9
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 242aa    MW: 27597.5 Da    PI: 10.1346
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG024960.9genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP80.12e-2520100171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 
                       rkeksL+lltq+f+kl+ + e ++v+l+e+a+ L+ e     ++++k+RR+YDi+NVL++lnliek     ++k+++rw g
  TRIDC7AG024960.9  20 RKEKSLGLLTQNFVKLFLTMEVETVSLDEAARLLLGErhaesNMRTKVRRLYDIANVLSSLNLIEKtqqvdSRKPAFRWLG 100
                       79****************************************************************9999999******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MLLISRTHPC ARVDLSVDHR KEKSLGLLTQ NFVKLFLTME VETVSLDEAA RLLLGERHAE  60
SNMRTKVRRL YDIANVLSSL NLIEKTQQVD SRKPAFRWLG QAKRKEGATV TVALPPARKI  120
MSSKRAFGTD ITNIDNKRGK LVLETENKPK LMQGGSSMLK TFESQLGQGK SSGFVYGPFH  180
PAGARKHEVD DQSVRENETK NIQDWENLAV SFRPQYQNHA LNDLFGHYVE AWKSWYLDLT  240
RE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.23e-61E2F/DP family protein