PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG022400.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 324aa    MW: 35996.4 Da    PI: 6.5846
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG022400.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.4e-191461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WTteEde+l  +++++G g+W++ ++  g++R++k+c++rw +yl
  TRIDC7AG022400.2 14 KGPWTTEEDEKLMSYIQKHGHGSWRSLPQLAGLNRCGKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding582.1e-1867112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++++eE++ ++++++ lG++ W++Ia++++ gRt++++k++w+++l
  TRIDC7AG022400.2  67 RGKFSQEEEQTILQLHTVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 112
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MGRPPSSDEN GLKKGPWTTE EDEKLMSYIQ KHGHGSWRSL PQLAGLNRCG KSCRLRWTNY  60
LKPDIKRGKF SQEEEQTILQ LHTVLGNKWS AIAKHLPGRT DNEIKNFWNT HLRKKLIKMG  120
IDPMTHRPRT DFFAALPQLI ALANLRQFIN QQPWDDHTAG LQAQTAQAAN LQYVQSLLHS  180
AASIAASPTT SSSLNSLTMD LEQINFLSPP QMLSPSVLEG NGGIDLAGQV AQNQMPSITF  240
DHTIGNINPG SDNHVETSGQ HRSEEENNSK KRQFLSENSL PPLTDMAASN ICNTISTSNC  300
DGVSSLFPSW SEILLDEELL SEFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.14e-91MYB family protein