PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG018070.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 386aa MW: 38420.8 Da PI: 6.0545

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG018070.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.7e-12	196	241	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR+ri +++ L+el+P+a K +Ka++L + ++Y+k Lq TRIDC7AG018070.4 196 HSIAERLRRERIAERMKSLQELVPNA-----NKTDKASMLDEIIDYVKFLQ 241 99*********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 386 aa Download sequence
SMAGGDGGGG GGAQDDFFDQ MLSTLPSAWG DLGAGGKSPW EIAAGAEDLG AFDESTLLAS 60 RLRQHQIGGE KPVMLQLTDL QRQGLGGEES GGTGFSPLPL FADRSPPQSR EEMDGGFKSP 120 NGTGGDHALF NGFGVHGGGT AVQPPFGQGG SMSGQSFGGG PAASGGTTAP ASSGGGAAPP 180 RQTRVRARRG QATDPHSIAE RLRRERIAER MKSLQELVPN ANKTDKASML DEIIDYVKFL 240 QLQVKVLSMS RLGGAAGMAP LVASMSSEGG GNSAAAAAAK ANGGGENGGG GGGGSGLRVT 300 EHQVAKMMEE DMGTAMQYLQ GKGLCLMPIS LASAISSATT TTTSPASLLA RQAVRPAAAA 360 AALASANGGG DAAAVRPVKV DAGAAS

Sequence ? help Back to Top

Protein Sequence Length: 386 aa Download sequence

SMAGGDGGGG GGAQDDFFDQ MLSTLPSAWG DLGAGGKSPW EIAAGAEDLG AFDESTLLAS  60
RLRQHQIGGE KPVMLQLTDL QRQGLGGEES GGTGFSPLPL FADRSPPQSR EEMDGGFKSP  120
NGTGGDHALF NGFGVHGGGT AVQPPFGQGG SMSGQSFGGG PAASGGTTAP ASSGGGAAPP  180
RQTRVRARRG QATDPHSIAE RLRRERIAER MKSLQELVPN ANKTDKASML DEIIDYVKFL  240
QLQVKVLSMS RLGGAAGMAP LVASMSSEGG GNSAAAAAAK ANGGGENGGG GGGGSGLRVT  300
EHQVAKMMEE DMGTAMQYLQ GKGLCLMPIS LASAISSATT TTTSPASLLA RQAVRPAAAA  360
AALASANGGG DAAAVRPVKV DAGAAS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	201	206	RLRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	2e-46	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG018070.4