PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG017860.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ARR-B | ||||||||
Protein Properties | Length: 606aa MW: 66447.2 Da PI: 6.5071 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 90.3 | 1.7e-28 | 207 | 260 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl TRIDC7AG017860.1 207 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 260 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.9 | 2e-12 | 209 | 259 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ +++t++++ s++qky+ TRIDC7AG017860.1 209 RVVWSVELHRKFVAAVNQLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 259 678********************************99*************7 PP | |||||||
3 | Response_reg | 78.5 | 2.3e-26 | 28 | 136 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p+ +++l+++l++ +y +v+++ ++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++ +ge + +l+ + TRIDC7AG017860.1 28 VLAVDDDPVCLKVLEVLLRRCQY-HVTTTNQAATALRLLRENKdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKSVLKGIT 118 799********************.***************99999********************87754.558******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ +eel++ TRIDC7AG017860.1 119 HGACDYLLKPVRIEELRN 136 ****************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 606 aa Download sequence |
MLLADMMMEA RKGLMERERD QFPVGMRVLA VDDDPVCLKV LEVLLRRCQY HVTTTNQAAT 60 ALRLLRENKD MFDLVISDVH MPDMDGFKLL ELVGLEMDLP VIMLSVNGET KSVLKGITHG 120 ACDYLLKPVR IEELRNVWQH VVRRKFCNRE PDNLDFCKDS YHRLGQAICD SHRSSDQSNR 180 ARRKRKELHS EEEDEGEDND DAAASKKPRV VWSVELHRKF VAAVNQLGID KAVPKRILEL 240 MNVEKLTREN VASHLQKYRL YLRRLSAVAS QQASIAAAFG GRDPFLHMGA FEGLHSYHQP 300 FAPSSGLPSF NPHGLLSGAG AAAFGLQDFV PSKAIQCDSS NGAISHCACD TIKFNIVSSQ 360 DNQQADLTQG LTASSSLGQR WIHQETNDLC SVFSRGALAS TMSSTFQRIT SSSLPPEDLL 420 ECTPHIKVGA HPSIGIQTAS SGLLERSQQG ALPIGDGFSI DKLPLHVSFD GAVATKPDAS 480 FAAEEQDMDQ KGIFSERMTV GVCPSESLIA ANNARCGASS SGSTLLLPHD TERHSKYLQF 540 GVASNSRHRM DGMRQDQRLN SGGFSYDGGA AIVPEHQQTD MDDLGTSKLQ GGSILAAATL 600 MAFSIP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 182 | 187 | RRKRKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-106 | ARR-B family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG017860.1 |