PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG017690.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 417aa MW: 46526.1 Da PI: 11.8083

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG017690.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	38.1	3.5e-12	368	415	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 rW+ E+e l ++v+q+G+ +Wk I + + gRt ++k++w++ TRIDC7AG017690.2 368 RWSSVEEETLRKGVEQFGSSNWKDILIHNPdafIGRTTVDLKDKWRNM 415 9*********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
AAADAGGRVT YPRPRRRGRV HPHRRRQRAL RGPPLPGPPH AAPPPLAAPP PPRHRPRLHR 60 RARLPPAPRL PPRPGPRVPR LRRAPRRRRL PRLLGARLRR RRAGPLRARR AVDDEEGGDP 120 ALASSEALVV ADQFEAAVGN AFSQEVLKGL FGDRAKAERR VRDLLAAEWA AIGPSRLELA 180 AEQIVGDGAV ETWRAADETV RAKYRILGMA RQKSGKEKTR EILSKIEDRI STPQVHKVIH 240 DLKSSCADLH NVVDDPLPAA KAAADKVLAA RMDKAVHIND EEFNNQAANC SIAGPSAVND 300 QGDTLRKGTP SSLMDWNPTA QSLLWEDSLD PDGSRSQSHR PHLPSPRRIL VSPLQVAENK 360 ARRRRARRWS SVEEETLRKG VEQFGSSNWK DILIHNPDAF IGRTTVDLKD KWRNMMR

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

AAADAGGRVT YPRPRRRGRV HPHRRRQRAL RGPPLPGPPH AAPPPLAAPP PPRHRPRLHR  60
RARLPPAPRL PPRPGPRVPR LRRAPRRRRL PRLLGARLRR RRAGPLRARR AVDDEEGGDP  120
ALASSEALVV ADQFEAAVGN AFSQEVLKGL FGDRAKAERR VRDLLAAEWA AIGPSRLELA  180
AEQIVGDGAV ETWRAADETV RAKYRILGMA RQKSGKEKTR EILSKIEDRI STPQVHKVIH  240
DLKSSCADLH NVVDDPLPAA KAAADKVLAA RMDKAVHIND EEFNNQAANC SIAGPSAVND  300
QGDTLRKGTP SSLMDWNPTA QSLLWEDSLD PDGSRSQSHR PHLPSPRRIL VSPLQVAENK  360
ARRRRARRWS SVEEETLRKG VEQFGSSNWK DILIHNPDAF IGRTTVDLKD KWRNMMR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	102	RRRRLPRLLGARLRRRR
2	87	103	RRRRLPRLLGARLRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G15720.1	5e-14	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG017690.2