PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG015360.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 350aa    MW: 37995.6 Da    PI: 7.1701
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG015360.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.35.6e-161962146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                      +g+++++E++l +++++qlG++ W++ a +++ gRt++++k++w++
  TRIDC7AG015360.2 19 KGAFSPDEELLVAQLHAQLGNK-WARMATHLP-GRTDNEIKNYWNT 62
                      799*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
CGKSCRLRWT NHLRPNLKKG AFSPDEELLV AQLHAQLGNK WARMATHLPG RTDNEIKNYW  60
NTRAKRRQRA GLPMYPPEVQ LQLAITKRCR YADFSPPQQS AGSNVLDATD AGYTSARPPP  120
LDLAGQLAMA NRPVQFLAQT PFSAPSSPWV KPSFARNARY FQFPHSSPVS PTTPELSLGH  180
RLPGGNRTRF TPLSPSPGAK AELPSCQLRP ASLAAVAATD NHGGGLGEDQ QNLEAMLQEL  240
HDAIKIEPPR HVSGHAEQDG ASGGNKSEGG LLKDDDDIGT LFDMIIPKAF SMTEPTAQAD  300
APNHSGGSIS QHGGEDHNVN LTVDHLPIIS SEQDWVLDGA CQWNNMFGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06100.14e-45MYB family protein