PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG015180.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 512aa MW: 57835.3 Da PI: 8.93

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG015180.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.5	6e-20	83	169	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + t+ Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7AG015180.6 83 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTYSCSRYGKAQSNSGN---MLKPSRTAGTGCKAKINITRAPDGRFHLSTVILDHNHTLSP 169 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
GPAPVRARAS LAAARRRSRG MDDGIGGVQE SSDMSISSDD DGITQRRESN VELAHGPAEA 60 QPDGSLGEPE VGMSFGTENE VREYYNTYAK AKGFGVTRRS SNRDDNGQLK YLTYSCSRYG 120 KAQSNSGNML KPSRTAGTGC KAKINITRAP DGRFHLSTVI LDHNHTLSPL KPRRFRCNKK 180 SDFRVKRRLE PNDPAEIRVN KSSTIPRVTH FDIEKQFQSA YTNSKFKEFQ EELTQTMYCD 240 RKLMQKEGAI ETYEITEDVL IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH 300 VLCVLTHKKI KEVPPQYVLD RWKKNVNRKH NFIRCTYGGM EDTPAAERFD RLCNSFYPVA 360 EIGAMSDDSC NALMEELHTL KIRFSSNSSS ENVKEHVATR EDAPSNGKTT SKTIPSPIAV 420 RCAGCPLPRK ESMLDKLICQ ANEKKKEAEQ KASSTNLNKK RPRKNRKSSV DGILEQPVME 480 HSSQQPVCLD GPASSITSQV YLFLIFLFVA NT

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

GPAPVRARAS LAAARRRSRG MDDGIGGVQE SSDMSISSDD DGITQRRESN VELAHGPAEA  60
QPDGSLGEPE VGMSFGTENE VREYYNTYAK AKGFGVTRRS SNRDDNGQLK YLTYSCSRYG  120
KAQSNSGNML KPSRTAGTGC KAKINITRAP DGRFHLSTVI LDHNHTLSPL KPRRFRCNKK  180
SDFRVKRRLE PNDPAEIRVN KSSTIPRVTH FDIEKQFQSA YTNSKFKEFQ EELTQTMYCD  240
RKLMQKEGAI ETYEITEDVL IDEDKGWRKD IVHHVYFSEE EFEVKCSCRR FEFTGILCRH  300
VLCVLTHKKI KEVPPQYVLD RWKKNVNRKH NFIRCTYGGM EDTPAAERFD RLCNSFYPVA  360
EIGAMSDDSC NALMEELHTL KIRFSSNSSS ENVKEHVATR EDAPSNGKTT SKTIPSPIAV  420
RCAGCPLPRK ESMLDKLICQ ANEKKKEAEQ KASSTNLNKK RPRKNRKSSV DGILEQPVME  480
HSSQQPVCLD GPASSITSQV YLFLIFLFVA NT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	189	RRFRCNKKSDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	8e-19	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG015180.6