PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG015180.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 572aa MW: 64003.1 Da PI: 8.3327

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG015180.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.3	7.1e-20	84	170	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + t+ Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7AG015180.11 84 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTYSCSRYGKAQSNSGN---MLKPSRTAGTGCKAKINITRAPDGRFHLSTVILDHNHTLSP 170 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
PALPQCGRAL LWRRLGGVPE GMDDGIGGVQ ESSDMSISSD DDGITQRRES NVELAHGPAE 60 AQPDGSLGEP EVGMSFGTEN EVREYYNTYA KAKGFGVTRR SSNRDDNGQL KYLTYSCSRY 120 GKAQSNSGNM LKPSRTAGTG CKAKINITRA PDGRFHLSTV ILDHNHTLSP LKPRRFRCNK 180 KSDFRVKRRL EPNDPAEIRV NKSSTIPRVT HFDIEKQFQS AYTNSKFKEF QEELTQTMYC 240 DRKLMQKEGA IETYEITEDV LIDEDKGWRK DIVHHVYFSE EEFEVKCSCR RFEFTGILCR 300 HVLCVLTHKK IKEVPPQYVL DRWKKNVNRK HNFIRCTYGG MEDTPAAERF DRLCNSFYPV 360 AEIGAMSDDS CNALMEELHT LKIRFSSNSS SENVKEHVAT REDAPSNGKT TSKTIPSPIA 420 VRCAGCPLPR KESMLDKLIC QANEKKKEAE QKASSTNLNK KRPRKNRKSS VDGILEQPVM 480 EHSSQQPVCL DGPASSITSQ RTFDLAITTS NINPSVTAAI PSGGSSTMVM PQILGEYTLM 540 PFQVQQGSTI VSSSAELHFD GIGGLNNKVD RS

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

PALPQCGRAL LWRRLGGVPE GMDDGIGGVQ ESSDMSISSD DDGITQRRES NVELAHGPAE  60
AQPDGSLGEP EVGMSFGTEN EVREYYNTYA KAKGFGVTRR SSNRDDNGQL KYLTYSCSRY  120
GKAQSNSGNM LKPSRTAGTG CKAKINITRA PDGRFHLSTV ILDHNHTLSP LKPRRFRCNK  180
KSDFRVKRRL EPNDPAEIRV NKSSTIPRVT HFDIEKQFQS AYTNSKFKEF QEELTQTMYC  240
DRKLMQKEGA IETYEITEDV LIDEDKGWRK DIVHHVYFSE EEFEVKCSCR RFEFTGILCR  300
HVLCVLTHKK IKEVPPQYVL DRWKKNVNRK HNFIRCTYGG MEDTPAAERF DRLCNSFYPV  360
AEIGAMSDDS CNALMEELHT LKIRFSSNSS SENVKEHVAT REDAPSNGKT TSKTIPSPIA  420
VRCAGCPLPR KESMLDKLIC QANEKKKEAE QKASSTNLNK KRPRKNRKSS VDGILEQPVM  480
EHSSQQPVCL DGPASSITSQ RTFDLAITTS NINPSVTAAI PSGGSSTMVM PQILGEYTLM  540
PFQVQQGSTI VSSSAELHFD GIGGLNNKVD RS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	174	190	RRFRCNKKSDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	9e-19	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG015180.11