PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG015180.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 505aa MW: 57180.5 Da PI: 8.7433

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG015180.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.5	5.8e-20	76	162	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YAk GF v++++s++ +ng+ + t+ Cs++gk+++++ + +++ + tgCkak+++++ dg+++++++ l+HnH+l+p TRIDC7AG015180.1 76 EYYNTYAKAKGFGVTRRSSNRD-DNGQLKYLTYSCSRYGKAQSNSGN---MLKPSRTAGTGCKAKINITRAPDGRFHLSTVILDHNHTLSP 162 69*************99998.8889************9988...88999999****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
PDPARGRGAR RRGMDDGIGG VQESSDMSIS SDDDGITQRR ESNVELAHGP AEAQPDGSLG 60 EPEVGMSFGT ENEVREYYNT YAKAKGFGVT RRSSNRDDNG QLKYLTYSCS RYGKAQSNSG 120 NMLKPSRTAG TGCKAKINIT RAPDGRFHLS TVILDHNHTL SPLKPRRFRC NKKSDFRVKR 180 RLEPNDPAEI RVNKSSTIPR VTHFDIEKQF QSAYTNSKFK EFQEELTQTM YCDRKLMQKE 240 GAIETYEITE DVLIDEDKGW RKDIVHHVYF SEEEFEVKCS CRRFEFTGIL CRHVLCVLTH 300 KKIKEVPPQY VLDRWKKNVN RKHNFIRCTY GGMEDTPAAE RFDRLCNSFY PVAEIGAMSD 360 DSCNALMEEL HTLKIRFSSN SSSENVKEHV ATREDAPSNG KTTSKTIPSP IAVRCAGCPL 420 PRKESMLDKL ICQANEKKKE AEQKASSTNL NKKRPRKNRK SSVDGILEQP VMEHSSQQPV 480 CLDGPASSIT SQVYLFLIFL FVANT

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

PDPARGRGAR RRGMDDGIGG VQESSDMSIS SDDDGITQRR ESNVELAHGP AEAQPDGSLG  60
EPEVGMSFGT ENEVREYYNT YAKAKGFGVT RRSSNRDDNG QLKYLTYSCS RYGKAQSNSG  120
NMLKPSRTAG TGCKAKINIT RAPDGRFHLS TVILDHNHTL SPLKPRRFRC NKKSDFRVKR  180
RLEPNDPAEI RVNKSSTIPR VTHFDIEKQF QSAYTNSKFK EFQEELTQTM YCDRKLMQKE  240
GAIETYEITE DVLIDEDKGW RKDIVHHVYF SEEEFEVKCS CRRFEFTGIL CRHVLCVLTH  300
KKIKEVPPQY VLDRWKKNVN RKHNFIRCTY GGMEDTPAAE RFDRLCNSFY PVAEIGAMSD  360
DSCNALMEEL HTLKIRFSSN SSSENVKEHV ATREDAPSNG KTTSKTIPSP IAVRCAGCPL  420
PRKESMLDKL ICQANEKKKE AEQKASSTNL NKKRPRKNRK SSVDGILEQP VMEHSSQQPV  480
CLDGPASSIT SQVYLFLIFL FVANT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	182	RRFRCNKKSDFRVKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32250.2	9e-19	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG015180.1