PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG014960.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 691aa MW: 79114.9 Da PI: 6.9294

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG014960.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	68.8	1.3e-21	54	140	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 Y++Y++++GFsvrk k+++ ++ i +++++Cskeg + +e + +++ +r+ trt+Cka+++ + +++g+w v++++ HnH+la TRIDC7AG014960.4 54 LYCDYGHRIGFSVRKGKQSYFIGTRDIRTKDYYCSKEGLKYDEPVT--EANFNRPDTRTNCKAMVRFRVDEKGRWTVIRFVPLHNHQLA 140 7******************9999************99988..9999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 691 aa Download sequence
MDSIPGSQEE LLRMRKNGEV GKKGEDHRNA LSRKEATEEL IGCMVHSEEE AYKLYCDYGH 60 RIGFSVRKGK QSYFIGTRDI RTKDYYCSKE GLKYDEPVTE ANFNRPDTRT NCKAMVRFRV 120 DEKGRWTVIR FVPLHNHQLA KPGERHLLRS AKSFAVGKSG VIDPAESAES HAGNGSSDRT 180 VGDISEPPGY TTRDCYNHDN VQNITLIGAG DSQSLVSYFK RRTNEEGMFY WDVQVDQEGR 240 MTNFFFRDGK SRSDYDCFGD AVIFDTTYRT NKYSLICAPF VGVNHHWHNV VFGFAFLLDD 300 STASYVWLFK SFLESMGGRS PKSIFTDQDE AIMQAAEQVF PNTQHCFSYW HILKNAQSHL 360 GTVNTSQAFQ NMFMKCMQGC DTEMELQESW DAMLDEYKLQ DNDWLNGLYK FHNRWCSVFN 420 KDTFDGGINS SQWGEVSNNI LTGVADESTS ITRFALLLEK VVKTLRRNES EEDFRCSQTA 480 PVRAIKHSTV LKQAAESYTH RMYKLFEAEF LDGCGATSCH ENSCGGSLLR FEITMQGRGS 540 KMWTVLLDTS TMEISCGCGK FERMGLLCSH ALKAFSLQNV DMVPEKYILK RWTKDARRSM 600 YNLSQEDSTQ QECTEAELAY RNRAMQYAYN LALKSQELEE ARKIFWDSLE TGEKALEVFF 660 EMRNLHAQSA KDASTREKKK KKIPKGPSTS K

Sequence ? help Back to Top

Protein Sequence Length: 691 aa Download sequence

MDSIPGSQEE LLRMRKNGEV GKKGEDHRNA LSRKEATEEL IGCMVHSEEE AYKLYCDYGH  60
RIGFSVRKGK QSYFIGTRDI RTKDYYCSKE GLKYDEPVTE ANFNRPDTRT NCKAMVRFRV  120
DEKGRWTVIR FVPLHNHQLA KPGERHLLRS AKSFAVGKSG VIDPAESAES HAGNGSSDRT  180
VGDISEPPGY TTRDCYNHDN VQNITLIGAG DSQSLVSYFK RRTNEEGMFY WDVQVDQEGR  240
MTNFFFRDGK SRSDYDCFGD AVIFDTTYRT NKYSLICAPF VGVNHHWHNV VFGFAFLLDD  300
STASYVWLFK SFLESMGGRS PKSIFTDQDE AIMQAAEQVF PNTQHCFSYW HILKNAQSHL  360
GTVNTSQAFQ NMFMKCMQGC DTEMELQESW DAMLDEYKLQ DNDWLNGLYK FHNRWCSVFN  420
KDTFDGGINS SQWGEVSNNI LTGVADESTS ITRFALLLEK VVKTLRRNES EEDFRCSQTA  480
PVRAIKHSTV LKQAAESYTH RMYKLFEAEF LDGCGATSCH ENSCGGSLLR FEITMQGRGS  540
KMWTVLLDTS TMEISCGCGK FERMGLLCSH ALKAFSLQNV DMVPEKYILK RWTKDARRSM  600
YNLSQEDSTQ QECTEAELAY RNRAMQYAYN LALKSQELEE ARKIFWDSLE TGEKALEVFF  660
EMRNLHAQSA KDASTREKKK KKIPKGPSTS K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-98	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG014960.4