PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG014310.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 273aa    MW: 31574.7 Da    PI: 9.6628
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG014310.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF922.8e-2955105151
                       S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       kri+nk+ rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+
  TRIDC7AG014310.2  55 KRIDNKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 105
                       79***********************************************96 PP
2K-box942.4e-3112821810100
             K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       + ++++s +qe+ kLk ++e Lq++qR+llGedL++L++keL+qLe+q+e slk+iR++K++  l+q+ el++ke++lq+ nk+Lrkk++e
  TRIDC7AG014310.2 128 TPETEQSNYQEYLKLKTRVEFLQTTQRNLLGEDLGPLNMKELEQLENQIEISLKHIRATKSQQSLDQLFELKRKEQQLQDVNKDLRKKIQE 218
                       45668999*********************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
REASTLRQLL LPPPPASAIR EEKRKEERGR ERPGKKRASE RQGGGRMGRG KVELKRIDNK  60
ISRQVTFAKR RNGLLKKAYE LSVLCDAEVA LIIFSTRGRL FEFSTSSCMY KTLERYRSCN  120
FNSEATATPE TEQSNYQEYL KLKTRVEFLQ TTQRNLLGED LGPLNMKELE QLENQIEISL  180
KHIRATKSQQ SLDQLFELKR KEQQLQDVNK DLRKKIQETS VENVLQMSCQ DVGPSGSSGH  240
ANQANQQEYF HHDCDPSLHI GYQRNFLDQL NKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02310.16e-76MIKC_MADS family protein