PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG014310.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 241aa MW: 27822.4 Da PI: 9.1486 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.3 | 2.3e-29 | 23 | 73 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 kri+nk+ rqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++g+l+e+s+ TRIDC7AG014310.1 23 KRIDNKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFST 73 79***********************************************96 PP | |||||||
2 | K-box | 94.4 | 1.9e-31 | 95 | 186 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++++s +qe+ kLk ++e Lq++qR+llGedL++L++keL+qLe+q+e slk+iR++K++ l+q+ el++ke++lq+ nk+Lrkk++e TRIDC7AG014310.1 95 ATPETEQSNYQEYLKLKTRVEFLQTTQRNLLGEDLGPLNMKELEQLENQIEISLKHIRATKSQQSLDQLFELKRKEQQLQDVNKDLRKKIQE 186 445668999*********************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
PGKKRASERQ GGGRMGRGKV ELKRIDNKIS RQVTFAKRRN GLLKKAYELS VLCDAEVALI 60 IFSTRGRLFE FSTSSCMYKT LERYRSCNFN SEATATPETE QSNYQEYLKL KTRVEFLQTT 120 QRNLLGEDLG PLNMKELEQL ENQIEISLKH IRATKSQQSL DQLFELKRKE QQLQDVNKDL 180 RKKIQETSVE NVLQMSCQDV GPSGSSGHAN QANQQEYFHH DCDPSLHIGY QRNFLDQLNK 240 E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.1 | 1e-76 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG014310.1 |