PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG014300.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 421aa MW: 47301.3 Da PI: 6.1036

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG014300.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2.1e-18	126	172	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +lv++v+q+G + W+ Ia++++ gR +kqc++rw+++l TRIDC7AG014300.1 126 KGQWTLEEDRKLVKLVEQFGLRKWSQIAQMLP-GRVGKQCRERWHNHL 172 799***************************.***********97 PP
2	Myb_DNA-binding	50.1	6.4e-16	178	220	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd l++ +k+ G++ W+ Ia++++ gRt++++k++w+ TRIDC7AG014300.1 178 KDTWSEEEDMVLIQTHKEVGNK-WAEIAKRLP-GRTENSIKNHWN 220 679*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MDFGCFQPHA GSCDDTPLDF HVQQSAHYDL HSLDRSFEPV GGSIGPFAAF YPDYYPQVAT 60 TKAVIGDASS IVHSSGPHLP LLTPKLEVSQ LIGGGLGSYK TYEMSRRFFP RKKASSKALK 120 RANVVKGQWT LEEDRKLVKL VEQFGLRKWS QIAQMLPGRV GKQCRERWHN HLRPNIKKDT 180 WSEEEDMVLI QTHKEVGNKW AEIAKRLPGR TENSIKNHWN ATKRRQFARR RTRTSAKNPK 240 SGTLLQNYIK SLGIGSSKVT AAPLAPKERP LSPSSPASPT QNLAQVSDSW SESNPSNIMV 300 SEGLFSTDDR QADSCEEILV PTCDDFSIDM CDGLFDTKED EQYPVYSIDD DVDMDYIFNH 360 MDYTIKIDHE IDMEMAWCDD ALANIESGSS PLVTVAGPAE IKTVQVKEEM NLVELVTRTE 420 T

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MDFGCFQPHA GSCDDTPLDF HVQQSAHYDL HSLDRSFEPV GGSIGPFAAF YPDYYPQVAT  60
TKAVIGDASS IVHSSGPHLP LLTPKLEVSQ LIGGGLGSYK TYEMSRRFFP RKKASSKALK  120
RANVVKGQWT LEEDRKLVKL VEQFGLRKWS QIAQMLPGRV GKQCRERWHN HLRPNIKKDT  180
WSEEEDMVLI QTHKEVGNKW AEIAKRLPGR TENSIKNHWN ATKRRQFARR RTRTSAKNPK  240
SGTLLQNYIK SLGIGSSKVT AAPLAPKERP LSPSSPASPT QNLAQVSDSW SESNPSNIMV  300
SEGLFSTDDR QADSCEEILV PTCDDFSIDM CDGLFDTKED EQYPVYSIDD DVDMDYIFNH  360
MDYTIKIDHE IDMEMAWCDD ALANIESGSS PLVTVAGPAE IKTVQVKEEM NLVELVTRTE  420
T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	4e-61	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG014300.1