PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG011210.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Whirly
Protein Properties Length: 167aa    MW: 19158.8 Da    PI: 7.5055
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG011210.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly175.41.2e-54313012139
            Whirly  12 kavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsG 104
                       +++ p+f+ l+sg+ k+ ++G++ll++a+a+++r+ydW +kq+f+ls+ e+++l+ l+  +sceffhdp+++ s+eGkvrk+lkveP pdG G
  TRIDC7AG011210.3   3 DPRPPQFVPLESGAYKVAKEGFVLLQFAPAVGPRQYDWTRKQVFSLSVWEMGTLLTLGLTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNG 95 
                       8999***************************************************************************************** PP

            Whirly 105 lfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                        f+nlsv+n l++++e++++P++k+e+av+ s ++
  TRIDC7AG011210.3  96 RFFNLSVQNRLLNVDENIYIPITKGEYAVIVSTFN 130
                       ******************************99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    
AFDPRPPQFV PLESGAYKVA KEGFVLLQFA PAVGPRQYDW TRKQVFSLSV WEMGTLLTLG  60
LTDSCEFFHD PFKGRSDEGK VRKVLKVEPT PDGNGRFFNL SVQNRLLNVD ENIYIPITKG  120
EYAVIVSTFN YIIPHIMGWS TFTNSIKPEE SQPYNRPQSS PELEWRR