PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG011180.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 322aa    MW: 35113.6 Da    PI: 10.6183
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG011180.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.98.9e-1267119855
               AP2   8 wdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +++++gr++A+++d  ++n    k+ k+++lg +  +e Aa+a++ a++k++g
  TRIDC7AG011180.3  67 RHRWTGRFEAHLWDkGTWNPtqkKKgKQVYLGAYNEEEAAARAYDLAALKYWG 119
                       89************888854566447*************************98 PP
2AP252.81e-16162213155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++ +grW+A+I   +   g +k+ +lg++ t eeAa+a++ a+ +++g
  TRIDC7AG011180.3 162 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 213
                       89****99**********99966...3.6*************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
DGVKISVKRR KREPPAGSGL SGVTGNGKDG AGDKSVGGNA AAKRSSRFRG VSRYVVLRIN  60
TAVSFCRHRW TGRFEAHLWD KGTWNPTQKK KGKQVYLGAY NEEEAAARAY DLAALKYWGP  120
TTYTNFPVVD YEKELKVMQG VSREEYLASI RRKSNGFSRG VSKYRGVARH HHNGRWEARI  180
GRVFGNKYLY LGTYSTQEEA ARAYDIAAIE YRGINAVTNF DLSTYIRWLK PGAAPAEAMS  240
GLSGAPSPSS TTTATTLVTP RDMGGLRLLP PSRNSLSLLG DVGSMVFGAG PSPSPSPSST  300
TTALSLLLRS SVFQELVAQQ HQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18694PTQKKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.35e-81AP2 family protein