PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG009460.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 307aa MW: 32651.3 Da PI: 9.9699 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.7 | 1.1e-19 | 121 | 175 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee+F+ +++++ ++++ LA++lgL rqV vWFqNrRa+ k TRIDC7AG009460.1 121 RKKLRLSKDQAAVLEECFKTHSTLNPKQKTALANRLGLRPRQVEVWFQNRRARTK 175 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 123.8 | 7.9e-40 | 121 | 211 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlsk+q+++LEe+F+++++L+p++K++la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC7AG009460.1 121 RKKLRLSKDQAAVLEECFKTHSTLNPKQKTALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNKRLEKEVAELR-ALK 211 69*************************************************************************************9.665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 307 aa Download sequence |
MHRAAAAGLD LGLGLGLGLA SQGSLTSSTT TASSSPASQA HAQHWTAALN SVVGAQESYG 60 LHPYASHQRK EEPGRTSTSP ESGVSAGTKR GLERTGSGVS RGAATAGSDE DDDGGDGAGG 120 RKKLRLSKDQ AAVLEECFKT HSTLNPKQKT ALANRLGLRP RQVEVWFQNR RARTKLKQTE 180 VDCEYMKRWC EQLAEQNKRL EKEVAELRAL KTAPAAHAQQ AATLTMCPSC RRVAATAAGP 240 AATQHQHQHQ QPQQCSPKPN AHPAGNVLPS HCQFFPSTTT AAAPDRSGRQ QGAWNGAAQP 300 LVTRELF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 170 | 178 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 1e-46 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG009460.1 |