PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG009440.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 66aa MW: 7416.43 Da PI: 11.6123 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.5 | 1.2e-18 | 9 | 62 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k +++k+q +Lee+F+ ++ ++ ++ + LA++lgL +qV vWF+NrRa+ k TRIDC7AG009440.1 9 KNLRMSKDQSAVLEECFKTHSALNPKQNTALANRLGLRPQQVEVWFHNRRARTK 62 556799**********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 82 | 8.8e-27 | 8 | 66 | 1 | 59 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkql 59 +k +r+sk+q+++LEe+F++++ L+p++ ++la++Lgl+p+qv+vWF nrRARtk+kq+ TRIDC7AG009440.1 8 RKNLRMSKDQSAVLEECFKTHSALNPKQNTALANRLGLRPQQVEVWFHNRRARTKLKQT 66 5899*****************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 66 aa Download sequence |
GGDGAGGRKN LRMSKDQSAV LEECFKTHSA LNPKQNTALA NRLGLRPQQV EVWFHNRRAR 60 TKLKQT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 57 | 65 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 2e-28 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG009440.1 |