PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG009430.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 170aa MW: 18730.7 Da PI: 10.4758 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 36.3 | 9.8e-12 | 19 | 47 | 28 | 56 |
HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 28 eereeLAkklgLterqVkvWFqNrRakek 56 +++ LA++lgL rqV vWFqNrRa+ k TRIDC7AG009430.4 19 KQKLALANSLGLRPRQVEVWFQNRRARTK 47 57778**********************98 PP | |||||||
2 | HD-ZIP_I/II | 89.1 | 5.3e-29 | 18 | 83 | 26 | 92 |
HD-ZIP_I/II 26 perKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC7AG009430.4 18 QKQKLALANSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNRRLEKEVAELR-ALK 83 589***********************************************************9.565 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence |
MERSMMGKEM TWISLHLQKQ KLALANSLGL RPRQVEVWFQ NRRARTKLKQ TEVDCEYMKR 60 WCEQLAEQNR RLEKEVAELR ALKAAPPAHN GASAGPLTTL TMCLSCKRVA STSSASACTV 120 PSFSSNAGIG MPVPSPVAMP EHRQFFCGFR DTGATYGSSA GLAKVVKAAR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 42 | 50 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 7e-39 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG009430.4 |