PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG009430.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 249aa MW: 26664.2 Da PI: 9.3604 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 61.8 | 1.1e-19 | 89 | 143 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++k+q +Lee+F+ +++++ +++ LA++lgL rqV vWFqNrRa+ k TRIDC7AG009430.3 89 RKKLRLSKDQAAVLEECFKTHHTLTPKQKLALANSLGLRPRQVEVWFQNRRARTK 143 788899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 123.7 | 8.7e-40 | 89 | 179 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlsk+q+++LEe+F+++++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e++kr++++l+e+n+rLekev+eLr +lk TRIDC7AG009430.3 89 RKKLRLSKDQAAVLEECFKTHHTLTPKQKLALANSLGLRPRQVEVWFQNRRARTKLKQTEVDCEYMKRWCEQLAEQNRRLEKEVAELR-ALK 179 69*************************************************************************************9.565 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MAPQSLDLGL SLGLGLVSQP TLPSFWYSGG NVAADQEVGP TPTAAAVEER RCSPGSPASS 60 GSGSGLKRGA ERSAGSGDED QDDDGGNARK KLRLSKDQAA VLEECFKTHH TLTPKQKLAL 120 ANSLGLRPRQ VEVWFQNRRA RTKLKQTEVD CEYMKRWCEQ LAEQNRRLEK EVAELRALKA 180 APPAHNGASA GPLTTLTMCL SCKRVASTGM PVPSPVAMPE HRQFFCGFRD TGATYGSSAG 240 LAKVVKAAR |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 146 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 8e-54 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG009430.3 |