PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC7AG007210.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 331aa MW: 36523.2 Da PI: 9.9438 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 381.8 | 1.1e-116 | 1 | 331 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye........paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkll 82 md+ g+re r+++ y+ p++++k++ +++l+++++erd++i er++al+ekkaa+aerdmaf+qrd+a+aern+a+verdn+l+ TRIDC7AG007210.2 1 MDNLGHREngRQRPdPYKalhtqwmmPQRQMKDHHSMNLLALMSERDTAIMERDHALAEKKAAMAERDMAFAQRDSAMAERNAAIVERDNALA 93 99999998899999888899999999889**************************************************************** PP GAGA_bind 83 alllvensla...salpvgvqvlsgtksidslqqlse.....pqledsave.lreeeklealpieeaaee.akekkkkkkrqrakkpkekkak 165 al+l++++ s ++++ ++l+g+k+ ++++q+ + ql+ds+++ +re+++++a+pi++a+ + a ++kk+kk++++++p+++ + TRIDC7AG007210.2 94 ALELARTNGFnmnSGNGFNPGSLNGAKNFHHHDQQPHaqsspLQLADSPYDhAREMHISDAYPISTAPVTaAGKAKKPKKNSSQASPLKRPSG 186 **9998875545588889999***********99877789999********9*************9976516789999***********9999 PP GAGA_bind 166 ..kkkkksekskkkvkkesader.......skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstk 249 +k+kk ++++ ++++ e+ +k+e+k++dl+ln+vs+Des++P+P+CsCtG+lrqCYkWGnGGWqS+CCt+++S+yPLPv+++ TRIDC7AG007210.2 187 vlRKTKKAGGDWRDAGMSGVGEDparaaseMKNERKDQDLGLNQVSFDESSMPAPACSCTGVLRQCYKWGNGGWQSSCCTMSMSMYPLPVMPN 279 887777788899999998877556788888*************************************************************** PP GAGA_bind 250 rrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +r+aR++grKmS++af+klL++LaaeG+dls vDLkdhWAkHGtn+++tir TRIDC7AG007210.2 280 KRHARMGGRKMSGSAFTKLLSRLAAEGHDLSASVDLKDHWAKHGTNRYITIR 331 ***************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 331 aa Download sequence |
MDNLGHRENG RQRPDPYKAL HTQWMMPQRQ MKDHHSMNLL ALMSERDTAI MERDHALAEK 60 KAAMAERDMA FAQRDSAMAE RNAAIVERDN ALAALELART NGFNMNSGNG FNPGSLNGAK 120 NFHHHDQQPH AQSSPLQLAD SPYDHAREMH ISDAYPISTA PVTAAGKAKK PKKNSSQASP 180 LKRPSGVLRK TKKAGGDWRD AGMSGVGEDP ARAASEMKNE RKDQDLGLNQ VSFDESSMPA 240 PACSCTGVLR QCYKWGNGGW QSSCCTMSMS MYPLPVMPNK RHARMGGRKM SGSAFTKLLS 300 RLAAEGHDLS ASVDLKDHWA KHGTNRYITI R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42520.1 | 6e-97 | BBR-BPC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC7AG007210.2 |