PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC7AG005090.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GRF

Protein Properties

Length: 372aa MW: 40368.8 Da PI: 8.7959

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC7AG005090.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.2	1.6e-24	108	152	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+ep+rCrRtDGKkWRCs+++ +++k+CErH+hrgr+rsrk++e+ TRIDC7AG005090.5 108 DPEPWRCRRTDGKKWRCSKEAHPDSKYCERHMHRGRNRSRKPVES 152 79****************************************986 PP
2	QLQ	63.2	6.9e-22	35	69	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FT+aQ+++L++Q+l+yKyL+a++PvPp+Ll++i+ TRIDC7AG005090.5 35 VFTPAQWAELEQQALIYKYLMAGVPVPPDLLLPIR 69 5********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MLSSSAAMGM GLGGYGQQQQ QQQMQMQMQR GAGPVFTPAQ WAELEQQALI YKYLMAGVPV 60 PPDLLLPIRP HPAGAGATFS FANPAASPFY HHHHPSMSYY AYYGKKLDPE PWRCRRTDGK 120 KWRCSKEAHP DSKYCERHMH RGRNRSRKPV ESKSASPAHQ SQQPPLSAVT SATRDAEPLP 180 SLPAGAKTHG LSLGGAGSSQ MHVDASSYGN KYVFGYSLGA KSDVGELSFF SGASGNNNRG 240 FTIDSPTDSS WHSMGSSLPP YQLSKPRDSG LMQGGFSYSH FEPSQELGQV TIASLSHSQE 300 QDRRSFGGGG GGGGGGAGLM GNVKQENQPL RPFFDEWPGR RDSWSEMDDE RSNGTSFSTT 360 QLSISIPMPR CD

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MLSSSAAMGM GLGGYGQQQQ QQQMQMQMQR GAGPVFTPAQ WAELEQQALI YKYLMAGVPV  60
PPDLLLPIRP HPAGAGATFS FANPAASPFY HHHHPSMSYY AYYGKKLDPE PWRCRRTDGK  120
KWRCSKEAHP DSKYCERHMH RGRNRSRKPV ESKSASPAHQ SQQPPLSAVT SATRDAEPLP  180
SLPAGAKTHG LSLGGAGSSQ MHVDASSYGN KYVFGYSLGA KSDVGELSFF SGASGNNNRG  240
FTIDSPTDSS WHSMGSSLPP YQLSKPRDSG LMQGGFSYSH FEPSQELGQV TIASLSHSQE  300
QDRRSFGGGG GGGGGGAGLM GNVKQENQPL RPFFDEWPGR RDSWSEMDDE RSNGTSFSTT  360
QLSISIPMPR CD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-38	GRF family protein

Link Out ? help Back to Top
Ensembl	TRIDC7AG005090.5