PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG002850.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 341aa    MW: 36213.9 Da    PI: 6.7046
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG002850.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.63e-181562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd+llvd++++ G g+W++ ++  g++R++k+c++rw +yl
  TRIDC7AG002850.3 15 KGPWTPEEDKLLVDYIQEKGHGSWRRLPKLAGLNRCGKSCRLRWTNYL 62
                      79********************************************97 PP
2Myb_DNA-binding54.82.2e-1768113148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rgr+T +E++l+++++ +lG++ W++Ia +++ +Rt++++k++w+++l
  TRIDC7AG002850.3  68 RGRFTDDEEKLIIHLHSLLGNK-WSSIATKLP-RRTDNEIKNYWNTHL 113
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MGRSPCCDGE AGVKKGPWTP EEDKLLVDYI QEKGHGSWRR LPKLAGLNRC GKSCRLRWTN  60
YLRPDIKRGR FTDDEEKLII HLHSLLGNKW SSIATKLPRR TDNEIKNYWN THLRKKLLGM  120
GIDPVTHRPR TDLSLLAGLP GLLAAAGNFG GAGSATGAWD MNALRLQADA AKFQLLQGLV  180
RALTTAAVPA PAPGMDNLMA LLAASSGGQS GMNNGGQHGV DQSMLLQQCQ WDGMNNLPAL  240
TNSAPASGMH NISGMFDGFG AGDGLSSTEL GCHGGASGSN VTVDAVAPPR PMVANDQECN  300
NNGGGGVSCE QTPASSPFDG LESLNLMDDL NTDGSWKDLL E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.25e-77MYB family protein