PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC7AG001500.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 268aa    MW: 29810.4 Da    PI: 5.7802
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC7AG001500.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.87.7e-113478147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT  E++++++a  ++  + W++I + +g  +t  q++s+ qky
  TRIDC7AG001500.4 34 RESWTDPEHDKFIEALLLFDRD-WRKIEAFVG-SKTVIQIRSHAQKY 78
                      789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MAAVMEPAVG VGGEGEGAEG PGRVRKPYTI TKSRESWTDP EHDKFIEALL LFDRDWRKIE  60
AFVGSKTVIQ IRSHAQKYFL KVQKNGTGEH LPPPRPKRKA AHPYPHNKAS KKEQGCVIPM  120
DAPTVATNSS ADDTFPSWDD VLAQPYSPRH TQDLGAANNS SSSIECQSGT WATSDAIEQE  180
IWPTSDAIEQ EIILPALHAM PDFAQVYNFL GGVFDPDTTG HLQKLREMDP IDAETWHPSY  240
SQAAMSVPRF SQCHIKTYET IPDRWILG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.12e-60MYB_related family protein