PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG069540.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 309aa    MW: 34924.9 Da    PI: 7.5275
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG069540.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.31.8e-10221001697
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                       +++ ++f ++ +++ +e+  +++  + g ++++k+i r   + ++ ++GW+eFv+a +++egD+v+F + g  +f l+ ++f
  TRIDC6BG069540.1  22 VSMRREFGSHLENIAPETEFVKIIARGGLVFDFKVI-RDDYEPFLSSGGWEEFVDATNIQEGDSVLFVYRG--NFCLKAHIF 100
                       566788886667777788899**************4.4444559999*********************976..555566666 PP
2B344.13.7e-142243051899
                       --HHH.HTT---..--SEEEEEE.TTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  18 lpkkfaeehggkkeesktltled.esgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + ++fa++  + +++++++ l+   + + W+ k+ + r+++++ ++ +GW+eFv +ngLk+gD+++F+ ++++++ l v+++r+
  TRIDC6BG069540.1 224 FCREFASAW-L-PTQKTKIYLQVvGKTKPWRTKFDVgRRGDRMSWIHNGWEEFVWDNGLKVGDVCLFEAKKKNGQMLIVHMIRS 305
                       344444333.2.456678999996777*******887888888*************************9888888888888775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
DECEMSGQMF TLAAAADVRY GVSMRREFGS HLENIAPETE FVKIIARGGL VFDFKVIRDD  60
YEPFLSSGGW EEFVDATNIQ EGDSVLFVYR GNFCLKAHIF NPSGHEKSFF FCQRPTEIFG  120
DVPSSTLCDQ CVMNGHEAHK ANDRPSMNLE DGSPPLSNHV GGPSQHTYIL ARGATLYTQM  180
KKRVEEKVQA IGSEIPIYVK KMTEISIIGS KGKGRGGRTY VVTFCREFAS AWLPTQKTKI  240
YLQVVGKTKP WRTKFDVGRR GDRMSWIHNG WEEFVWDNGL KVGDVCLFEA KKKNGQMLIV  300
HMIRSEIEV