PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG068710.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 290aa    MW: 34226.8 Da    PI: 8.5848
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG068710.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.11.5e-2388177190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                       +fYn+YAk  GFsvrk++ k++   g  ++r ++Cskeg+r+ ++ + ++++r++ra +r+gC+a+l+++++  + +w v++++ +HnHe++
  TRIDC6BG068710.1  88 EFYNRYAKAKGFSVRKANVKNK--GGIRIQRLYMCSKEGYRSLKNFErSNRKRKPRALSRCGCDARLQIELNMeSREWFVKDFVDQHNHEFT 177
                       6****************98877..8999*************9988775789999*****************99899*************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
LPCLPRPEPS CPSVPSASNR SCGRHLPLHY RRLISCHCWL RLFIRLYHCW SACRKLHNMD  60
AHHVSMEEIE EYYTVVSQTF TSEEQGFEFY NRYAKAKGFS VRKANVKNKG GIRIQRLYMC  120
SKEGYRSLKN FERSNRKRKP RALSRCGCDA RLQIELNMES REWFVKDFVD QHNHEFTKPD  180
QTPFLWSHRG LNDPQKADAI EYGIGGLRTH QIMDVMEKQH GGYDKVGCVS RDLYNFIAEY  240
KKQRIEGFDA QYMLNYMAAQ EERDSEFFYR YSTDSEGHLQ NLFWSDAVGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-34FAR1 family protein