PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG065300.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 252aa    MW: 27992.8 Da    PI: 8.6678
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG065300.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.11.2e-16349455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       hn  E+rRR +iN+++  L++l+P++      K +Ka++L  A+eY+k+Lq
  TRIDC6BG065300.2  3 VHNLSEKRRRCKINEKMKALQSLVPNS-----SKTDKASMLDDAIEYLKHLQ 49
                      5*************************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
AEVHNLSEKR RRCKINEKMK ALQSLVPNSS KTDKASMLDD AIEYLKHLQL QVQMLSMRNG  60
VYRPSVNLPG APDHLPTSQM CAALNQNSVD ASSNRPAAML PMSHFLGAMS GTRHPFGPPN  120
QDRPRHEPLV LSSVPCTTTR EPPFLLGPSQ ESPLRSLQLT LPAEMIFQEE AMLKHRLSST  180
QETTSMPVGH EIKQPVRQET PAERAGHFDA CSIWKNQSHD MTPNNPESVL FAPHFRRFGS  240
GTADSGLRAE SK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.13e-31bHLH family protein