PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG059730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 166aa    MW: 17516.6 Da    PI: 7.5808
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG059730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.3e-172372255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr++k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  TRIDC6BG059730.1 23 KYKGVRRRK-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAFVCLRG 72
                      8*****998.**********933...5*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
GMSTSSPASG AASPEAEGGG GRKYKGVRRR KWGKWVSEIR LPNSRERIWL GSYDAPEKAA  60
RAFDAAFVCL RGPGAAGADL NFPDSPPPPC RHSVDPQEVQ AAALSHANRA TVSAREAAAA  120
LMDVPSWPQH ENGAMDIFGG EVAAAPDGSI DWRSVMAHQP PLFSPT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.11e-22ERF family protein