PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG057920.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 301aa    MW: 35524.5 Da    PI: 7.2106
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG057920.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.37.4e-08152194145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       r +W++ + +l+++a +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC6BG057920.8 152 RAKWSKSDTDLFYQALQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 194
                       569*******************.*********.*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
FNLPCFKRFP TEQNCLRRTS RKIKSEVSSR GRKRDMKDTL AEQPEKKLSH RIRPKRAKVS  60
EVKTLLEKPD HEIDRMKLSV MHLRLLHDAR ERIKSKTIPS GPSSSNQSTS QFGDTNSFDH  120
FEENYDNDRR ENHVLENATK LNYHSYMNKQ ARAKWSKSDT DLFYQALQQF GSDFAMIQQL  180
FPDKSRDQVR QKFKTEEKKH PMQVHDAILH RSRDNLYLKQ VIKQLNIEDL QRDINSTHKQ  240
EVASIEGDTG NEHVLQDFME EENDSNWSDK ELGMRQSEVR EGEHVSGNAD DDLDLDVFDW  300
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.11e-35MYB_related family protein