PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG057920.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 266aa    MW: 31300.6 Da    PI: 6.0558
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG057920.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.2e-08117159145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       r +W++ + +l+++a +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC6BG057920.3 117 RAKWSKSDTDLFYQALQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 159
                       569*******************.*********.*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MKDTLAEQPE KKLSHRIRPK RAKVSEVKTL LEKPDHEIDR MKLSVMHLRL LHDARERIKS  60
KTIPSGPSSS NQSTSQFGDT NSFDHFEENY DNDRRENHVL ENATKLNYHS YMNKQARAKW  120
SKSDTDLFYQ ALQQFGSDFA MIQQLFPDKS RDQVRQKFKT EEKKHPMQVH DAILHRSRDN  180
LYLKQVIKQL NIEDLQRDIN STHKQEVASI EGDTGNEHVL QDFMEEENDS NWSDKELGMR  240
QSEVREGEHV SGNADDDLDL DVFDWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.12e-33MYB_related family protein