PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG057920.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 155aa MW: 18289.1 Da PI: 4.6256 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.8 | 2.5e-08 | 6 | 48 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r +W++ + +l+++a +q+G++ ++ I + ++ +++ q++ ++ TRIDC6BG057920.10 6 RAKWSKSDTDLFYQALQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 48 569*******************.*********.*********996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MNKQARAKWS KSDTDLFYQA LQQFGSDFAM IQQLFPDKSR DQVRQKFKTE EKKHPMQVHD 60 AILHRSRDNL YLKQVIKQLN IEDLQRDINS THKQEVASIE GDTGNEHVLQ DFMEEENDSN 120 WSDKELGMRQ SEVREGEHVS GNADDDLDLD VFDWY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39160.1 | 4e-26 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG057920.10 |