PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG057920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 367aa    MW: 42455.6 Da    PI: 8.7564
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG057920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.9e-08218260145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       r +W++ + +l+++a +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC6BG057920.1 218 RAKWSKSDTDLFYQALQQFGSD-FAMIQQLFP-DKSRDQVRQKFK 260
                       569*******************.*********.*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 367 aa     Download sequence    
RPPLRRPTSP VASRSSLLAR LGYSSVERPH PHVAPSTASL SHLLVSRHAL APLTGRRHHC  60
GVTGADLVAI YPCFLIFDLN CLRRTSRKIK SEVSSRGRKR DMKDTLAEQP EKKLSHRIRP  120
KRAKVSEVKT LLEKPDHEID RMKLSVMHLR LLHDARERIK SKTIPSGPSS SNQSTSQFGD  180
TNSFDHFEEN YDNDRRENHV LENATKLNYH SYMNKQARAK WSKSDTDLFY QALQQFGSDF  240
AMIQQLFPDK SRDQVRQKFK TEEKKHPMQV HDAILHRSRD NLYLKQVIKQ LNIEDLQRDI  300
NSTHKQEVAS IEGDTGNEHV LQDFMEEEND SNWSDKELGM RQSEVREGEH VSGNADDDLD  360
LDVFDWY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.13e-34MYB_related family protein