PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG057130.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GeBP | ||||||||
Protein Properties | Length: 266aa MW: 29504.1 Da PI: 4.851 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 43.2 | 1.1e-13 | 82 | 171 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 +f+r+ws +De+ +L +l ++++g+ p+ d a+++ + ++++ ++ +++l K+ L++++ +kk g+ skehd+ ++elsk TRIDC6BG057130.8 82 AFNRIWSTDDEVRILEALAAHQKQHGTLPQPD--ALVDALAGKLDNRAyGSKELQGKVLALRRRYLLLSKK---GEP--PSKEHDRRVLELSK 167 699***********************887775..8999999999887516889****************99...555..4789********** PP DUF573 94 kiWg 97 ++W+ TRIDC6BG057130.8 168 MVWE 171 ***7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
DSSSDEEEEE PTKAAPPSAL KKQPPPPPPP RQSEESDASD EEEEEGESEE EAPPPPPPKL 60 APKQAPEGRK PQAAAETKKP AAFNRIWSTD DEVRILEALA AHQKQHGTLP QPDALVDALA 120 GKLDNRAYGS KELQGKVLAL RRRYLLLSKK GEPPSKEHDR RVLELSKMVW EGGDTAAAAP 180 AKAANGQEPK GFEEMCELYP YLAEQVRELD AANPGIFKRQ FGMMDDDKAR AMDEKIKRQR 240 VAQMKVELRR HDLAREVTKA IIDLVD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 235 | 240 | KIKRQR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61730.1 | 3e-10 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG057130.8 |