PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG056910.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 406aa    MW: 45554 Da    PI: 7.1052
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG056910.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox65.85.9e-211772156
                      TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                      +++ +++t+ q+++Le++F+++++p++++r +L+++lgL+ rq+k+WFqNrR+++k
  TRIDC6BG056910.4 17 KKRYHRHTPRQIQQLEAMFKECPHPDENQRMHLSRELGLEPRQIKFWFQNRRTQMK 72
                      678899***********************************************998 PP
2START116.53.8e-372103912164
                       HHHHHHHHHHHHHHHC-TT-EEEE...EXCCTTEEEEEEESSS........SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEE CS
             START   2 laeeaaqelvkkalaeepgWvkss...esengdevlqkfeeskv.......dsgealrasgvvdmvlallveellddkeqWdetla....kae 80 
                       +a +a++e++++a+a+e +Wvk +   e +n d++ ++f++ ++        ++e +r+s +v   +  lv +++d++ +W+e ++    +a 
  TRIDC6BG056910.4 210 MATRAMDEFIRLAQAGEHLWVKAAggrEVLNVDTYDSIFAKPGSssfrgpdVHVEGSRDSCLVLTSAIALVDTFMDSS-KWTEFFPtivtRAR 301
                       5789***********************99999999999987766899*******************************.************** PP

                       EEEEECTT.....EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEE CS
             START  81 tlevissg.....galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskv 164
                       t++v+ +g     + l+lm+ el ++sp+vp R+f f+Ry+rq ++g w+i+dvSvd +++    ++ +R+++lpSg+li ++sng+skv
  TRIDC6BG056910.4 302 TIDVLVNGmagrsESLVLMYEELHVMSPVVPtREFCFLRYCRQIEQGLWAIADVSVDLQRDARYGAPPARSRRLPSGCLIADMSNGYSKV 391
                       *************************************************************988*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MDFGDDLVPG SDAHRRKKRY HRHTPRQIQQ LEAMFKECPH PDENQRMHLS RELGLEPRQI  60
KFWFQNRRTQ MKAQHERADN CFLRAENDKI RCENIAMREA LKNVICPTCG GPHSGADDYF  120
DEHKLRMENA HLKEELDRVS SLTSKYLGRP ITQLPSMQPL SMSSLELSVG GLGSPLALGP  180
ALDLDPLGGS SPFQLPAPVS EMERPMMAEM ATRAMDEFIR LAQAGEHLWV KAAGGREVLN  240
VDTYDSIFAK PGSSSFRGPD VHVEGSRDSC LVLTSAIALV DTFMDSSKWT EFFPTIVTRA  300
RTIDVLVNGM AGRSESLVLM YEELHVMSPV VPTREFCFLR YCRQIEQGLW AIADVSVDLQ  360
RDARYGAPPA RSRRLPSGCL IADMSNGYSK VRTSPASACG IDRSVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17920.11e-128HD-ZIP family protein