PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG056120.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 236aa    MW: 24125 Da    PI: 9.9178
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG056120.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.2e-20111162156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                       s+++GVr+++ +g+W+AeIrdp     +   r +lg+f+ta eAa+a++ a+++++g+
  TRIDC6BG056120.2 111 SKFRGVRQRP-WGKWAAEIRDP-----HraVRKWLGTFDTAAEAARAYDVAALEFRGH 162
                       79********.**********7.....338**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MVPRLERGGF QLPNSEQENS LFLRALISVV SGDTAAPAPH QLAPSTPPFA PAPATAAAAC  60
ARCGVDGCLG CEFVAAAAAT TGSSSEGEEC SAASFVKNGG VGKRRAGGGG SKFRGVRQRP  120
WGKWAAEIRD PHRAVRKWLG TFDTAAEAAR AYDVAALEFR GHRAKLNFPA SSSSASASAS  180
AREPSREVRV KCVVAGARSA AAGAGEAGGA GAGDLGRAAR DHDDGRRQLL VQPQAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.14e-19ERF family protein