PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG054700.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | E2F/DP | ||||||||
Protein Properties | Length: 206aa MW: 22944.1 Da PI: 10.3114 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 37.3 | 4.7e-12 | 9 | 42 | 42 | 71 |
E2F_TDP 42 krRRiYDilNVLealnliek....kekneirwkg 71 k+RR+YDi+NVL++l+liek ++k+++rw g TRIDC6BG054700.8 9 KVRRLYDIANVLSSLKLIEKtqvdTRKPAFRWLG 42 79********************999*******87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MSYVYATAKV RRLYDIANVL SSLKLIEKTQ VDTRKPAFRW LGMAGKPKAE NGVTIVASPA 60 SKTLSNKRVF GTELTNIGIN RSKLEPTIQK KAKLAQGGAD ILKNHNVAAQ KQPGQVNKSG 120 FVYGPFHPSC ARKQEPDECN NVGQKAIAHD WESLADSFRP QYQNPALGDL FAHYVDAWKS 180 WYFEFSQGSS IMQQHLGSSV NNKRFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-34 | E2F/DP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG054700.8 |