PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG054700.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 288aa    MW: 32135.2 Da    PI: 7.6324
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG054700.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP79.62.8e-2545124171
           E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 
                       rkeksL+lltq+f+kl+ + e  +++l+e+ak L+ e     ++++k+RR+YDi+NVL++l+liek    ++k+++rw g
  TRIDC6BG054700.6  45 RKEKSLGLLTQNFVKLFLTMEVSTISLDEAAKFLLGEdheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFRWLG 124
                       79**********************************9*******************************999*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MSDDEDDDKL GVPEAETEGE KLSQTVDNPS DMPDAPPCRL RSDHRKEKSL GLLTQNFVKL  60
FLTMEVSTIS LDEAAKFLLG EDHEESNMRT KVRRLYDIAN VLSSLKLIEK TQVDTRKPAF  120
RWLGMAGKPK AENGVTIVAS PASKTLSNKR VFGTELTNIG INRSKLEPTI QKKAKLAQGG  180
ADILKNHNVA AQKQPGQVNK SGFVYGPFHP SCARKQEPDE CNNVGQKAIA HDWESLADSF  240
RPQYQNPALG DLFAHYVDAW KSWYFEFSQG SSIMQQHLGS SVNNKRFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.22e-56E2F/DP family protein