PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG054700.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 343aa MW: 38008.1 Da PI: 8.7571

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG054700.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	48.5	1.4e-15	5	48	23	71
E2F_TDP 23 givtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 + + l++++++L v +rRRiYDi+NVLe+++++++k+kn+++w+g TRIDC6BG054700.5 5 ESIGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 48 56899*****...99..**************************98 PP
2	E2F_TDP	79.2	3.8e-25	127	206	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 rkeksL+lltq+f+kl+ + e +++l+e+ak L+ e ++++k+RR+YDi+NVL++l+liek ++k+++rw g TRIDC6BG054700.5 127 RKEKSLGLLTQNFVKLFLTMEVSTISLDEAAKFLLGEdheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFRWLG 206 79********************************9***************************999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
RDGVESIGLD DASRRLGVER RRIYDIVNVL ESVGILARKA KNRYSWIGFG GVPMALRELK 60 ERALREKSGL APPPAEELSA ANMSDDEDDD KLGVPEAETE GEKLSQTVDN PSDMPDAPPC 120 RLRSDHRKEK SLGLLTQNFV KLFLTMEVST ISLDEAAKFL LGEDHEESNM RTKVRRLYDI 180 ANVLSSLKLI EKTQVDTRKP AFRWLGMAGK PKAENGVTIV ASPASKTLSN KRVFGTELTN 240 IGINRSKLEP TIQKKAKLAQ GGADILKNHN VAAQKQPGQV NKSGFVYGPF HPSCARKQEP 300 DECNNVGQKA IAHDWESLAD SFRPQYQNPG WYLSALLWSG FVP

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

RDGVESIGLD DASRRLGVER RRIYDIVNVL ESVGILARKA KNRYSWIGFG GVPMALRELK  60
ERALREKSGL APPPAEELSA ANMSDDEDDD KLGVPEAETE GEKLSQTVDN PSDMPDAPPC  120
RLRSDHRKEK SLGLLTQNFV KLFLTMEVST ISLDEAAKFL LGEDHEESNM RTKVRRLYDI  180
ANVLSSLKLI EKTQVDTRKP AFRWLGMAGK PKAENGVTIV ASPASKTLSN KRVFGTELTN  240
IGINRSKLEP TIQKKAKLAQ GGADILKNHN VAAQKQPGQV NKSGFVYGPF HPSCARKQEP  300
DECNNVGQKA IAHDWESLAD SFRPQYQNPG WYLSALLWSG FVP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.1	4e-75	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG054700.5