PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG054700.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 388aa MW: 43216 Da PI: 9.0406

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG054700.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	70.8	1.5e-22	1	66	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l+ + + + l++++++L v +rRRiYDi+NVLe+++++++k+kn+++w+g TRIDC6BG054700.2 1 RKQKSLGLLCSNFVALYDRDGVESIGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 66 79***************999********.....****************************98 PP
2	E2F_TDP	78.9	4.7e-25	145	224	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 rkeksL+lltq+f+kl+ + e +++l+e+ak L+ e ++++k+RR+YDi+NVL++l+liek ++k+++rw g TRIDC6BG054700.2 145 RKEKSLGLLTQNFVKLFLTMEVSTISLDEAAKFLLGEdheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFRWLG 224 79********************************9***************************999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
RKQKSLGLLC SNFVALYDRD GVESIGLDDA SRRLGVERRR IYDIVNVLES VGILARKAKN 60 RYSWIGFGGV PMALRELKER ALREKSGLAP PPAEELSAAN MSDDEDDDKL GVPEAETEGE 120 KLSQTVDNPS DMPDAPPCRL RSDHRKEKSL GLLTQNFVKL FLTMEVSTIS LDEAAKFLLG 180 EDHEESNMRT KVRRLYDIAN VLSSLKLIEK TQVDTRKPAF RWLGMAGKPK AENGVTIVAS 240 PASKTLSNKR VFGTELTNIG INRSKLEPTI QKKAKLAQGG ADILKNHNVA AQKQPGQVNK 300 SGFVYGPFHP SCARKQEPDE CNNVGQKAIA HDWESLADSF RPQYQNPALG DLFAHYVDAW 360 KSWYFEFSQG SSIMQQHLGS SVNNKRFL

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

RKQKSLGLLC SNFVALYDRD GVESIGLDDA SRRLGVERRR IYDIVNVLES VGILARKAKN  60
RYSWIGFGGV PMALRELKER ALREKSGLAP PPAEELSAAN MSDDEDDDKL GVPEAETEGE  120
KLSQTVDNPS DMPDAPPCRL RSDHRKEKSL GLLTQNFVKL FLTMEVSTIS LDEAAKFLLG  180
EDHEESNMRT KVRRLYDIAN VLSSLKLIEK TQVDTRKPAF RWLGMAGKPK AENGVTIVAS  240
PASKTLSNKR VFGTELTNIG INRSKLEPTI QKKAKLAQGG ADILKNHNVA AQKQPGQVNK  300
SGFVYGPFHP SCARKQEPDE CNNVGQKAIA HDWESLADSF RPQYQNPALG DLFAHYVDAW  360
KSWYFEFSQG SSIMQQHLGS SVNNKRFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	3e-98	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG054700.2