PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG054700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family E2F/DP
Protein Properties Length: 409aa    MW: 44796 Da    PI: 8.6574
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG054700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP55.97.1e-1868126871
           E2F_TDP   8 lltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                        l+ +f++l+ +   + + l++++++L    v  +rRRiYDi+NVLe+++++++k+kn+++w+g
  TRIDC6BG054700.1  68 CLCCSFVALYDRDGVESIGLDDASRRL---GV--ERRRIYDIVNVLESVGILARKAKNRYSWIG 126
                       58999*******999************...**..****************************98 PP
2E2F_TDP79.53.1e-25205285171
           E2F_TDP   1 rkeksLrlltqkflklleksee.givtlnevakeLvse.....dvknkrRRiYDilNVLealnliek....kekneirwkg 71 
                       rkeksL+lltq+f+kl+ + e+  +++l+e+ak L+ e     ++++k+RR+YDi+NVL++l+liek    ++k+++rw g
  TRIDC6BG054700.1 205 RKEKSLGLLTQNFVKLFLTMEQvSTISLDEAAKFLLGEdheesNMRTKVRRLYDIANVLSSLKLIEKtqvdTRKPAFRWLG 285
                       79*****************9999**************9*******************************999*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
RTRCRCSPSA AGARGCATTP TAASRSRSAC SAPSECPATH LSFASVWPYL ILARPGICVS  60
LTQFHIACLC CSFVALYDRD GVESIGLDDA SRRLGVERRR IYDIVNVLES VGILARKAKN  120
RYSWIGFGGV PMALRELKER ALREKSGLAP PPAEELSAAN MSDDEDDDKL GVPEAETEGE  180
KLSQTVDNPS DMPDAPPCRL RSDHRKEKSL GLLTQNFVKL FLTMEQVSTI SLDEAAKFLL  240
GEDHEESNMR TKVRRLYDIA NVLSSLKLIE KTQVDTRKPA FRWLGMAGKP KAENGVTIVA  300
SPASKTLSNK RVFGTELTNI GINRSKLEPT IQKKAKLAQG GADILKNHNV AAQKQPGQVN  360
KSGFVYGPFH PSCARKQEPD ECNNVGQKAI AHDWESLADS FRPQYQNPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.11e-81E2F/DP family protein