PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG053780.9 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 67aa MW: 7504.51 Da PI: 11.9803 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 27.2 | 9.5e-09 | 13 | 47 | 1 | 38 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgt 38 s y+GV+++ k+grW A+I g ++ ++lg+f t TRIDC6BG053780.9 13 SIYRGVTRRQKDGRWQARIGLiA---G-TRDIYLGTFST 47 57****************88822...2.5********77 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 67 aa Download sequence |
MSRRSSCFSR GASIYRGVTR RQKDGRWQAR IGLIAGTRDI YLGTFSTMHI PNSAPLELSS 60 TVTHFSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51190.1 | 4e-19 | AP2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG053780.9 |